Function
matchRefinement
Refines (i.e. cuts into smaller parts) a set of pairwise segment
matches in such a way that none of the segments partly overlap. They are either
identical (fully overlapping) or non-overlapping.
Include Headers
seqan/refinement.h
Parameters
|  The set of matches. | |
|  The scoring scheme used to score the refined matches (scores are attached to
edges in the refined Alignment Graph). Types:  Score Remarks: If no scoring scheme is given, all edges get weight 1. | |
|  The StringSet containing the sequences which the matches lie on. Types:  StringSet | |
|  The resulting refined set of matches stored in a graph. Types:  Alignment Graph | 
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